Imaging

A topic I have formal education in, moved away from, then came back to later to work on directly and indirectly.

Contributions

  • FibreAnalysis, an opinionated approach to segmenting SEM images of collagen fibres using classical methods.
  • RetinaGen, a component of RetinaSim. Used for generating realistic looking synthetic retinas for machine learning.

Publications

  1. E. Brown, A. Guy, N. Holroyd, P. Sweeney, L. Gourmet, H. Coleman, C. Walsh, R. Shipley, R. Rajendram, S. Walker-Samuel, ‘Physics-informed deep generative learning for quantitative assessment of the retina’, Jul. 2023. bioRxiv
  2. A. W. Justin, F. Cammarata, A. A. Guy, S. R. Estevez, S. Burgess, H. Davaapil, A. Stavropoulou-Tatla, J. Ong, A. G. Jacob, K. Saeb-Parsy, S. Sinha, and A. E. Markaki, ‘Densified Collagen Tubular Grafts for Human Tissue Replacement and Disease Modelling Applications’, Biomaterials Advances, vol. 145, pp. 213–245, 2023, DOI: 10.1016/j.bioadv.2022.213245.